classyfire_api/lib/classyfire_api.rb

70 lines
2.0 KiB
Ruby

require 'JSON'
require 'RestClient'
module ClassyFireAPI
URL = 'http://classyfire.wishartlab.com'
def ClassyFireAPI.submit_query(label,input)
begin
RestClient.post URL+'/queries', {:label => label, :query_input => input}.to_json, :accept => :json, :content_type => :json
rescue RestClient::BadRequest => e
e.response
rescue RestClient::InternalServerError => e
e.response
rescue RestClient::GatewayTimeout => e
e.response
rescue RestClient::RequestTimeout => e
e.response
end
end
def ClassyFireAPI.get_query(query_id,format="json")
# format can be either 'json' or 'sdf'
begin
if format == "json"
puts "#{URL}/queries/#{query_id}.json"
RestClient.get "#{URL}/queries/#{query_id}.json", :accept => :json
elsif format == "sdf"
puts "#{URL}/queries/#{query_id}.sdf"
RestClient.get "#{URL}/queries/#{query_id}.sdf", :accept => :sdf
end
rescue RestClient::ResourceNotFound => e
e.response
rescue RestClient::InternalServerError => e
e.response
rescue RestClient::GatewayTimeout => e
e.response
rescue RestClient::RequestTimeout => e
e.response
end
end
def ClassyFireAPI.get_entity_classification(inchikey,format="json")
# format can be either 'json' or 'sdf'
inchikey_id = inchikey.to_s.gsub('InChIKey=','')
begin
if format == "json"
RestClient.get "#{URL}/entities/#{inchikey_id}.#{format}", :accept => :json
elsif format == "sdf"
RestClient.get "#{URL}/entities/#{inchikey_id}.#{format}", :accept => :sdf
end
rescue RestClient::ResourceNotFound => e
e.response
rescue RestClient::InternalServerError => e
e.response
rescue RestClient::GatewayTimeout => e
e.response
rescue RestClient::RequestTimeout => e
e.response
end
end
def ClassyFireAPI.query_status(query_id)
s = JSON.parse(get_query(query_id))
if s['error']
s
elsif s['classification_status:']
s['classification_status']
end
end
end