Curie-Web/app/misc/common.py

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import os
import glob
from shutil import copy
def CopyContentOfFolder(sauce,destination):
src_files = os.listdir(sauce)
for file_name in src_files:
full_file_name = os.path.join(sauce, file_name)
if os.path.isfile(full_file_name):
copy(full_file_name, destination)
def RemoveAllFilesMatching(directory,pattern):
print(directory+"/*"+pattern)
FileList = glob.glob(directory+"/*"+pattern)
for FilePath in FileList:
try:
os.remove(FilePath)
except:
print("Error in removing misc file")
def get3DModel(protein,ligand):
try:
import pymol2
except ImportError:
print("🤭 PyMOL 2 has not been installed correctly")
return None
session = pymol2.PyMOL()
session.start()
cmd = session.cmd
cmd.load(protein,"target")
cmd.load(ligand,"ligand")
cmd.save("model.dae")
session.stop()